Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CPSF3, cleavage and polyadenylation specific factor 3, 73kDa
Sequence ID:NM_016207
Entrez Gene ID:51692
Ensembl ID:ENSG00000119203

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 9572655 - 9593142

 Exon Info From UCSC:
NM_016207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4304135Full LengthBC011654cleavage and polyadenylation specific factor 3, 73kDa
4890593Full LengthBC020211cleavage and polyadenylation specific factor 3, 73kDa
4130680IncompleteBC014106cleavage and polyadenylation specific factor 3, 73kDa
4806442IncompleteBC030988cleavage and polyadenylation specific factor 3, 73kDa
5295012IncompleteBC043432cleavage and polyadenylation specific factor 3, 73kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057291  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016207 NP_057291 Q9UKF6 Lactamase_B
RMMBL

Related Sequences

 
mRNAGenPeptSwissProt
AF017269 AAB70268 Q9UKF6
AF171877 AAF00224 Q9UKF6
BC011654 AAH11654 Q9UKF6
BC020211 AAH20211 Q9UKF6
BC030988 AAH30988 Q05BZ5
EF036508 ABO65094 A4UCU1
EU176402 ABW03853  
AK223487 BAD97207 Q53F02
AK298918 BAG61024 B4DQR2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPSF3 NP_057291 M.musculus Cpsf3 54451 Gene Info NP_061283 99
R.norvegicus Cpsf3 298916   NP_001025201 98
A.gambiae AgaP_AGAP001224 1281946   XP_321933 78
D.melanogaster Cpsf73 42240   NP_650738 68
C.elegans cpsf-3 178285   NP_502553 61
A.thaliana CPSF73-I 842393   NP_849835 56
S.pombe ysh1 2542258   NP_594263 50
S.cerevisiae YSH1 850983   NP_013379 47
N.crassa NCU03479 3872515   XP_956368 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta