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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TAF10, TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
Sequence ID:NM_006284
RefSeqGene ID:NG_008653
Entrez Gene ID:6881
Ensembl ID:ENSG00000166337

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6627452 - 6628637

NM_006284 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117066320726632241
17128566324196632533
28635066326186632682
35150566328946633048
50676266331886633444

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4562773Full LengthBC012088TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006275  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006284 NP_006275 Q12962 TFIID_30kDa

Related Sequences

 
mRNAGenPeptSwissProt
U13991 AAA62230 Q12962
BC012088 AAH12088 Q12962
CR541943 CAG46741 Q12962

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF10 NP_006275 R.norvegicus Taf10 293345   NP_001128207 93
M.musculus Taf10 24075 Gene Info NP_064408 92
D.melanogaster Taf10b 33468   NP_477418 60
A.thaliana TAFII15 829300   NP_194900 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)