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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TECR, trans-2,3-enoyl-CoA reductase
Sequence ID:NM_138501
NR_038103
NR_038104
NM_004868
RefSeqGene ID:NG_028336
Entrez Gene ID:9524
Ensembl ID:ENSG00000099797

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 14640438 - 14676792


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3163592Full LengthBC002425glycoprotein, synaptic 2
3928698Full LengthBC013881glycoprotein, synaptic 2
4128702Full LengthBC007801glycoprotein, synaptic 2
4249841Full LengthBC005952glycoprotein, synaptic 2
2901253IncompleteBC000174glycoprotein, synaptic 2
3935809IncompleteBC005384glycoprotein, synaptic 2
4823258IncompleteBC034484glycoprotein, synaptic 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612510  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_138501 NP_612510 Q9NZ01 EC 1.3.1.93 Steroid_dh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF038958 AAC39872 Q9NZ01 EC 1.3.1.93
AF038959 AAC39873 Q9NZ01 EC 1.3.1.93
AF222742 AAF32373 Q9NZ01 EC 1.3.1.93
BC000174 AAH00174 Q9NZ01 EC 1.3.1.93
BC002425 AAH02425 Q9NZ01 EC 1.3.1.93
BC005952 AAH05952 Q9NZ01 EC 1.3.1.93
BC007801 AAH07801 Q9NZ01 EC 1.3.1.93
BC013881 AAH13881 Q9NZ01 EC 1.3.1.93
BT007179 AAP35843 Q9NZ01 EC 1.3.1.93
DQ891949 ABM82875    
DQ895135 ABM86061    
EU832830 ACE87841    
GQ129437 ACT64571    
AK315412 BAG37802 Q9NZ01 EC 1.3.1.93
AK001416 BAG50909 B3KM97  
AK094087 BAG52813 B3KSQ1  
AK299134 BAG61186 B4DR74  
CR456892 CAG33173 Q9NZ01 EC 1.3.1.93

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TECR NP_612510 M.musculus Tecr 106529 Gene Info NP_598879 97
R.norvegicus Tecr 191576   NP_612558 97
A.gambiae AgaP_AGAP010714 1272513   XP_311426 55
D.melanogaster Sc2 38457   NP_647836 55
C.elegans art-1 174140   NP_495430 54
S.pombe SPBC646.07c 2541070   NP_595365 44
A.thaliana CER10 824702   NP_191096 43
P.falciparum PF11_0370 810917   XP_001348041 42
S.cerevisiae TSC13 851547   NP_010269 38
N.crassa NCU03362 3872444   XP_956297 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)