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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CALM3, calmodulin 3 (phosphorylase kinase, delta)
Sequence ID:NM_005184
Entrez Gene ID:808
Ensembl ID:ENSG00000160014

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 47111218 - 47114038

NM_005184 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11834710451147104693
1842144710908347109113
2153584711145347111596
3594654711173847111844
4666014711210247112237
60222584711238147114037

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504793Full LengthBC005137calmodulin 3 (phosphorylase kinase, delta)
3528814Full LengthBC006182calmodulin 3 (phosphorylase kinase, delta)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005175  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005184 NP_005175 P62158 efhand

Related Sequences

 
mRNAGenPeptSwissProt
J04046 AAA51918 P62158
BC005137 AAH05137 P62158
BC006182 AAH06182 Q9BRL5
BT006855 AAP35501 P62158
AK295927 BAG58713 B4DJ51

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CALM3 NP_005175 H.sapiens CALM1 801 Gene Info NP_008819 100
H.sapiens CALM2 805 Gene Info NP_001734 100
A.thaliana CAM2 818710   NP_001189724 89
N.crassa NCU04120 3877440   XP_961276 85
S.pombe cam1 2543039   NP_593340 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta