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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VANGL1, Vang-like 1 (van gogh, Drosophila)
Sequence ID:NM_138959
NM_001172411
NM_001172412
RefSeqGene ID:NG_016548
Entrez Gene ID:81839
Ensembl ID:ENSG00000173218

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
SPINA BIFIDA, SUSCEPTIBILITYTOCCL2
FUZ
T
T

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 116185249 - 116234055

 Exon Info From UCSC:
NM_138959
NM_001172411
NM_001172412

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6165098Full LengthBC065272vang-like 1 (van gogh, Drosophila)
4430257IncompleteBC032773vang-like 1 (van gogh, Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620409  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172411 NP_001165882    
NM_001172412 NP_001165883    
NM_138959 NP_620409 Q8TAA9 Strabismus

Related Sequences

 
mRNAGenPeptSwissProt
BC000907 AAH00907 Q96J52
BC032773 AAH32773 Q8TAA9
BC065272 AAH65272 Q8TAA9
AF481859 AAO61751 Q8TAA9
AB057596 BAB86334 Q8TAA9
AB075805 BAB86362 Q8TAA9
AK312087 BAG35023 Q96J52

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VANGL1 NP_001165883 R.norvegicus Vangl1 690366   NP_001103054 96
M.musculus Vangl1 229658 Gene Info NP_808213 95
A.gambiae AgaP_AGAP012288 1280402   XP_320249 51
D.melanogaster Vang 35922   NP_477177 49
C.elegans vang-1 180579   NP_508500 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)