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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FEM1A, fem-1 homolog a (C. elegans)
Sequence ID:NM_018708
Entrez Gene ID:55527
Ensembl ID:ENSG00000141965

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 4791867 - 4795569

NM_018708 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1384247917274795568

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2957950Full LengthBC004988fem-1 homolog a (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061178  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018708 NP_061178 Q9BSK4 Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC004988 AAH04988 Q9BSK4
AY356352 AAR10439 Q9BSK4
EU446817 ABZ92346  
AK315554 BAG37930 Q9BSK4
AL359589 CAB94875 Q9BSK4
AL365408 CAB96952 Q9BSK4
AJ311359 CAC85342 Q9BSK4
CR749732 CAH18491 Q9BSK4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FEM1A NP_061178 M.musculus Fem1a 14154 Gene Info NP_034322 91
R.norvegicus Fem1a 316131   NP_001020877 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)