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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GNA13, guanine nucleotide binding protein (G protein), alpha 13
Sequence ID:NM_006572
Entrez Gene ID:10672
Ensembl ID:ENSG00000120063

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 63006832 - 63008858

NM_006572 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
355416300540863010946
554255926301437063014420
559358196304961963049845
582063116305242863052919

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5548632Full LengthBC036756guanine nucleotide binding protein (G protein), alpha 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006563  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006572 NP_006563 Q14344 G-alpha

Related Sequences

 
mRNAGenPeptSwissProt
L22075 AAA74235 Q14344
BC036756 AAH36756 Q14344
AF493902 AAM12616 Q14344
DQ893572 ABM84498  
DQ894448 ABM85374  
AK313672 BAG36424 Q14344
AK301699 BAG63171 B4DWV9
AK302400 BAH13696 B7Z7R0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GNA13 NP_006563 M.musculus Gna13 14674 Gene Info NP_034433 97
R.norvegicus Gna13 303634   NP_001013137 97
D.melanogaster cta 3355131   NP_001036421 57
A.gambiae AgaP_AGAP009457 1269257   XP_307876 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta