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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C19orf6, Chromosome 19 open reading frame 6
Sequence ID:NM_001033026
NM_033420
Entrez Gene ID:91304
Ensembl ID:ENSG00000182087

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 1009649 - 1021141

 Exon Info From UCSC:
NM_001033026
NM_033420

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964663Full LengthBC008957chromosome 19 open reading frame 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033026 NP_001028198 Q4ZIN3  
NM_033420 NP_219488    

Related Sequences

 
mRNAGenPeptSwissProt
BC008957 AAH08957 Q4ZIN3
AY140906 AAN25597 Q8IWT9
DQ005958 AAY27747 Q4ZIN3
DQ893224 ABM84150  
DQ896554 ABM87553  
AK090400 BAC03381 Q4ZIN3
AK095756 BAG53122 B3KTL0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C19orf6 NP_001028198 M.musculus ORF61 216157 Gene Info NP_001003949 89
R.norvegicus Mbrl 299608   NP_001094356 89
D.melanogaster CG8405 36772   NP_725521 53
C.elegans Y59C2A.2 173576   NP_494212 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)