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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCPEP1, serine carboxypeptidase 1
Sequence ID:NM_021626
Entrez Gene ID:59342
Ensembl ID:ENSG00000121064

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 55055542 - 55084143

 Exon Info From UCSC:
NM_021626

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6137668Full LengthBC072405serine carboxypeptidase 1
4328599IncompleteBC010078serine carboxypeptidase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067639  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021626 NP_067639 Q9HB40 Peptidase_S10

Related Sequences

 
mRNAGenPeptSwissProt
AF282618 AAG16692 Q9HB40
AF113214 AAG39285 Q9HB40
AF265441 AAG44699 Q9H2J9
BC072405 AAH72405 Q9HB40
AY358559 AAQ88923 Q9HB40
HQ447580 ADQ32066  
AK027373 BAB55069 Q9HB40
AK298161 BAG60434 B4DP22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCPEP1 NP_067639 R.norvegicus Scpep1 114861   NP_596874 83
M.musculus Scpep1 74617 Gene Info NP_083299 82
A.thaliana SCPL51 817336   NP_565663 45
C.elegans Y32F6A.5 179459   NP_872130 45
D.melanogaster CG32483 318050   NP_728540 42
A.gambiae AgaP_AGAP011442 1278251   XP_317861 40
D.melanogaster CG3344 38083   NP_612051 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)