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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHI3L2, chitinase 3-like 2
Sequence ID:NM_001025197
NM_001025199
NM_004000
Entrez Gene ID:1117
Ensembl ID:ENSG00000064886

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 111742947 - 111744900

 Exon Info From UCSC:
NM_001025197
NM_001025199
NM_004000

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4214121Full LengthBC011460chitinase 3-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003991  NP_001020370  NP_001020368  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025197 NP_001020368   Glyco_hydro_18
NM_001025199 NP_001020370   Glyco_hydro_18
NM_001271833 NP_001258762    
NM_004000 NP_003991 Q15782 Glyco_hydro_18
NM_024901 NP_079177 Q9H6A0 DENN
dDENN
uDENN

Related Sequences

 
mRNAGenPeptSwissProt
U58514 AAB04533 Q15782
U58515 AAB04534 Q15782
U49835 AAC50597 Q15782
BC004557 AAH04557 Q9H6A0
BC011460 AAH11460 Q15782
BT006767 AAP35413 Q15782
DQ893705 ABM84631  
HQ448356 ADQ32836  
AK026110 BAB15363 Q9H6A0
AK223316 BAD97036 Q53FH2
AK298466 BAG60679 Q15782
AK301583 BAG63074 B4DWL2
AL713773 CAD28535 Q8TCN6

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)