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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCL5, Chemokine (C-C motif) ligand 5
Sequence ID:NM_002985
RefSeqGene ID:NG_015990
Entrez Gene ID:6352
Ensembl ID:ENSG00000161570

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34199350 - 34207312

NM_002985 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
119813419849734199467
98210933420553134205642
109412373420723334207376

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4185200Full LengthBC008600chemokine (C-C motif) ligand 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002976  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002985 NP_002976 P13501 IL8

Related Sequences

 
mRNAGenPeptSwissProt
M21121 AAA36725 P13501
AF043341 AAC03541 P13501
AF266753 AAF73070 P13501
BC008600 AAH08600 P13501
DQ230537 ABB69929 P13501
DQ891490 ABM82416  
DQ894681 ABM85607  
AK312212 BAG35145 B2R5J8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL5 NP_002976 M.musculus Ccl5 20304 Gene Info NP_038681 80
R.norvegicus Ccl5 81780   NP_112378 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta