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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TWSG1, twisted gastrulation homolog 1 (Drosophila)
Sequence ID:NM_020648
Entrez Gene ID:57045
Ensembl ID:ENSG00000128791

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18p11.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 9334807 - 9400817

NM_020648 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115493347649334917
15531493371909337349
31541493599699360068
41568193962779396543
682163993993439400300
1641375694003019402416

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3889103Full LengthBC020490twisted gastrulation homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065699  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020648 NP_065699 Q9GZX9 Tsg

Related Sequences

 
mRNAGenPeptSwissProt
AF294628 AAG10076 Q9GZX9
AF196834 AAG43468 Q9GZX9
BC020490 AAH20490 Q9GZX9
HQ447098 ADQ31585  
AK027629 BAB55246 Q9GZX9
AK075550 BAC11693 Q9GZX9
AK315751 BAG38105 Q9GZX9
AJ297391 CAC05581 Q9GZX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TWSG1 NP_065699 M.musculus Twsg1 65960 Gene Info NP_075540 94
R.norvegicus Twsg1 363294   NP_001102281 94
A.gambiae AgaP_AGAP000304 1271959   XP_310820 43
D.melanogaster cv 44510   NP_536786 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)