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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SSTR2, somatostatin receptor 2
Sequence ID:NM_001050
RefSeqGene ID:NG_029371
Entrez Gene ID:6752
Ensembl ID:ENSG00000180616

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 71161148 - 71166673

NM_001050 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12687116115971161426
26929627116536671168059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3875163Full LengthBC019610somatostatin receptor 2
6971895Full LengthBC095495somatostatin receptor 2
3354783IncompleteBC009522somatostatin receptor 2
3357456IncompleteBC000256somatostatin receptor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001041  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001050 NP_001041 P30874 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC000256 AAH00256 P30874
BC009522 AAH09522 P30874
BC019610 AAH19610 P30874
BC095495 AAH95495 P30874
BT019926 AAV38729 P30874
DQ891280 ABM82206  
AK290745 BAF83434 P30874
AK313866 BAG36594 B2R9P7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SSTR2 NP_001041 M.musculus Sstr2 20606 Gene Info NP_001036071 94
R.norvegicus Sstr2 54305   NP_062221 93
A.gambiae GPRSMS 1280421   XP_320274 48
D.melanogaster AlCR2 40019   NP_649039 45
C.elegans R106.2 187897   NP_510833 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)