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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOPNL, FGFR1OP N-terminal like
Sequence ID:NM_144600
Entrez Gene ID:123811
Ensembl ID:ENSG00000133393

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 15959576 - 15982447

NM_144600 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117971595957615961372
179819341596734715967483
193520191597366015973744
202022171597786415978061
221822501598241415982446

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4702249Full LengthBC022321chromosome 16 open reading frame 63

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144600 NP_653201 Q96NB1  

Related Sequences

 
mRNAGenPeptSwissProt
BC022321 AAH22321 Q96NB1
AY507846 AAR98812 Q96NB1
HQ447790 ADQ32274  
AK055715 BAB70994 Q96NB1
AK056798 BAG51811 B3KPU9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOPNL NP_653201 M.musculus 0610037P05Rik 66086 Gene Info NP_079621 80
R.norvegicus Fopnl 360461   NP_001101731 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)