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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ORMDL3, ORM1-like 3 (S. cerevisiae)
Sequence ID:NM_139280
Entrez Gene ID:94103
Ensembl ID:ENSG00000172057

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 38077295 - 38078029

NM_139280 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116433807729538078937
164417953807936438079515
179619913808028238080477
199221093808373638083853

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3850211Full LengthBC017087ORM1-like 3 (S. cerevisiae)
6340437Full LengthBC071833ORM1-like 3 (S. cerevisiae)
3345116IncompleteBC000638ORM1-like 3 (S. cerevisiae)
3858178IncompleteBC054042ORM1-like 3 (S. cerevisiae)
4421460IncompleteBC050710ORM1-like 3 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_644809  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139280 NP_644809 Q8N138 ORMDL

Related Sequences

 
mRNAGenPeptSwissProt
AF151043 AAF36129 Q9P0R7
BC017087 AAH17087 Q8N138
BC071833 AAH71833 Q8N138
AF395708 AAM43507 Q8N138
AF373101 AAN76521 Q8N138
AF373102 AAN76522 Q8N138
AY357943 AAQ57273 Q8N138
HQ447484 ADQ31970  
AK074811 BAC11223 Q8N138
AK075212 BAC11476 Q8N138
AK093063 BAG52645 Q8N138
AX775843 CAE11621 Q8N138

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ORMDL3 NP_644809 M.musculus Ormdl3 66612 Gene Info NP_079937 97
R.norvegicus Ormdl3 360618   NP_001041362 97
A.gambiae AgaP_AGAP010566 1275300   XP_558099 54
D.melanogaster ORMDL 40404   NP_730669 50
A.thaliana AT1G01230 839331   NP_563622 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)