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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCL3, Chemokine (C-C motif) ligand 3
Sequence ID:NM_002983
RefSeqGene ID:NG_027730
Entrez Gene ID:6348
Ensembl ID:ENSG00000006075

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AIDS, RAPID PROGRESSION TOCCL11
CCL2
CCL3L1
CD209
CX3CR1
CXCL12
CXCR1
HLA-C
HLA-C
HLA-C
IFNG
IL10
IL4R
IL4R
KIR3DL1

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34416005 - 34416643

NM_002983 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
205233441560434416107
5246383441652834416642
6398133441733134417505

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5935287Full LengthBC071834chemokine (C-C motif) ligand 3
9054485Full LengthBC171831chemokine (C-C motif) ligand 3
9054545Full LengthBC171891chemokine (C-C motif) ligand 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002974  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002983 NP_002974 P10147 IL8

Related Sequences

 
mRNAGenPeptSwissProt
M23452 AAA36316 P10147
M25315 AAA57255 P10147
AF043339 AAC03539 P10147
BC071834 AAH71834 P10147
BC171831 AAI71831 A0N0R1
BC171891 AAI71891 A0N0R1
D00044 BAA00029 P10147
D63785 BAA09855 Q14745
X03754 CAA27388 P10147

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta