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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GIT1, G protein-coupled receptor kinase interacting ArfGAP 1
Sequence ID:NM_001085454
NM_014030
Entrez Gene ID:28964
Ensembl ID:ENSG00000108262

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 27901595 - 27916409

 Exon Info From UCSC:
NM_001085454
NM_014030

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3050971IncompleteBC001369G protein-coupled receptor kinase interactor 1
3532103IncompleteBC005031G protein-coupled receptor kinase interacting ArfGAP 1
3940565IncompleteBC006227G protein-coupled receptor kinase interacting ArfGAP 1
4545101IncompleteBC032098G protein-coupled receptor kinase interacting ArfGAP 1
5467199IncompleteBC048196G protein-coupled receptor kinase interacting ArfGAP 1
6083358IncompleteBC067358G protein-coupled receptor kinase interactor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054749  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001085454 NP_001078923    
NM_014030 NP_054749 Q9Y2X7 Ank
ArfGap
GIT_SHD

Related Sequences

 
mRNAGenPeptSwissProt
AF124490 AAD28046 Q9Y2X7
BC005031 AAH05031 Q9BSI3
BC006227 AAH06227 Q9Y2X7
BC032098 AAH32098 Q6PIN6
BC048196 AAH48196 Q9Y2X7
AB209537 BAD92774 Q59FC3
AK294785 BAG57910 Q9Y2X7
AK297443 BAG59869 B4DMF7
AK299615 BAG61543 B4DS81
AK299932 BAG61765 Q9Y2X7
BX537553 CAD97779 Q7Z2E5
BX537554 CAD97780 Q7Z2E5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GIT1 NP_001078923 M.musculus Git1 216963 Gene Info NP_001004144 98
R.norvegicus Git1 83709   NP_114002 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)