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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NT5M, 5',3'-nucleotidase, mitochondrial
Sequence ID:NM_020201
Entrez Gene ID:56953
Ensembl ID:ENSG00000205309

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 17206648 - 17250975

NM_020201 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14521720667917207130
4535531720985617209956
5546141722649817226558
6157291724810717248221
73015861725011817250974

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5727827Full LengthBC0358385',3'-nucleotidase, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064586  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020201 NP_064586 Q9NPB1 NT5C

Related Sequences

 
mRNAGenPeptSwissProt
AF210652 AAF87076 Q9NPB1
BC035838 AAH35838 Q9NPB1
DQ323995 ABC88597 Q2I378

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NT5M NP_064586 R.norvegicus Nt5m 287368   NP_001099255 89
M.musculus Nt5m 103850 Gene Info NP_598790 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)