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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CXCL16, Chemokine (C-X-C motif) ligand 16
Sequence ID:NM_022059
NM_001100812
Entrez Gene ID:58191
Ensembl ID:ENSG00000161921

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 4636835 - 4642735

 Exon Info From UCSC:
NM_022059
NM_001100812

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4837010Full LengthBC017588chemokine (C-X-C motif) ligand 16
5762458Full LengthBC044930chemokine (C-X-C motif) ligand 16

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100812 NP_001094282    
NM_022059 NP_071342    

Related Sequences

 
mRNAGenPeptSwissProt
AF275260 AAG31750 Q9H2A7
AF301016 AAG34365 Q9H2A7
BC017588 AAH17588 Q9H2A7
BC044930 AAH44930 Q9H2A7
AF337812 AAK38275 Q9H2A7
AY358909 AAQ89268 Q9H2A7
HQ448003 ADQ32484  
AK027389 BAB55078 Q9H2A7
AK292114 BAF84803 Q9H2A7
AK315017 BAG37507 Q9H2A7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXCL16 NP_071342 M.musculus Cxcl16 66102 Gene Info NP_075647 51
R.norvegicus Cxcl16 497942   NP_001017478 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)