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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CBFA2T3, Core-binding factor, runt domain, alpha subunit 2; translocated to, 3
Sequence ID:NM_005187
RefSeqGene ID:NG_029533
Entrez Gene ID:863
Ensembl ID:ENSG00000129993

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 88941282 - 89043373

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5202447Full LengthBC062624core-binding factor, runt domain, alpha subunit 2; translocated to, 3
5227349Full LengthBC047019core-binding factor, runt domain, alpha subunit 2; translocated to, 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005178  NP_787127  

Protein Infomation

NM_005187 NP_005178 O75081 zf-MYND
NM_175931 NP_787127   zf-MYND

Related Sequences

AF052220 AAC64698 O75081
BC047019 AAH47019 O75081
BC062624 AAH62624 O75081
EU446890 ABZ92419  
AB010419 BAA29061 O75081
AB010420 BAA29062 O75081
AK314766 BAG37304 B2RBQ7
AK090985 BAG52257 B3KR45

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CBFA2T3 NP_005178 M.musculus Cbfa2t3 12398 Gene Info NP_033954 90
R.norvegicus Cbfa2t3 361431   NP_001101923 89
A.gambiae AgaP_AGAP010867 1271092   XP_309838 50
D.melanogaster nvy 37886   NP_523841 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)