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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBFA2T3, Core-binding factor, runt domain, alpha subunit 2; translocated to, 3
Sequence ID:NM_005187
NM_175931
RefSeqGene ID:NG_029533
Entrez Gene ID:863
Ensembl ID:ENSG00000129993

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 88941282 - 89043373

 Exon Info From UCSC:
NM_005187
NM_175931

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5202447Full LengthBC062624core-binding factor, runt domain, alpha subunit 2; translocated to, 3
5227349Full LengthBC047019core-binding factor, runt domain, alpha subunit 2; translocated to, 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005178  NP_787127  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005187 NP_005178 O75081 zf-MYND
TAFH
NM_175931 NP_787127   zf-MYND
TAFH

Related Sequences

 
mRNAGenPeptSwissProt
AF052220 AAC64698 O75081
BC047019 AAH47019 O75081
BC062624 AAH62624 O75081
EU446890 ABZ92419  
AB010419 BAA29061 O75081
AB010420 BAA29062 O75081
AK314766 BAG37304 B2RBQ7
AK090985 BAG52257 B3KR45

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBFA2T3 NP_005178 M.musculus Cbfa2t3 12398 Gene Info NP_033954 90
R.norvegicus Cbfa2t3 361431   NP_001101923 89
A.gambiae AgaP_AGAP010867 1271092   XP_309838 50
D.melanogaster nvy 37886   NP_523841 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)