Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH16, cadherin 16, KSP-cadherin
Sequence ID:NM_001204744
NM_001204745
NM_001204746
NM_004062
Entrez Gene ID:1014
Ensembl ID:ENSG00000166589

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 66942058 - 66952730


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5206766Full LengthBC027912cadherin 16, KSP-cadherin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004053  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204744 NP_001191673    
NM_001204745 NP_001191674    
NM_001204746 NP_001191675    
NM_004062 NP_004053 O75309 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
AF016272 AAC34255 O75309
BC027912 AAH27912 O75309
AY358911 AAQ89270 O75309
DQ893807 ABM84733  
EU176180 ABW03631  
AK313101 BAG35925 B2R7S8
AK298255 BAG60520 B4DPA8
AK298334 BAG60583 B4DPH1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH16 NP_004053 M.musculus Cdh16 12556 Gene Info NP_031689 78
R.norvegicus Cdh16 307614   NP_001012055 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)