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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IVD, isovaleryl-CoA dehydrogenase
Sequence ID:NM_001159508
NM_002225
RefSeqGene ID:NG_011986
Entrez Gene ID:3712
Ensembl ID:ENSG00000128928

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q14-q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 40707344 - 40711341

 Exon Info From UCSC:
NM_001159508
NM_002225

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3627787Full LengthBC017202isovaleryl Coenzyme A dehydrogenase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002216  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001159508 NP_001152980      
NM_002225 NP_002216 P26440 EC 1.3.8.4 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M34192 AAA52711 P26440 EC 1.3.8.4
BC017202 AAH17202 Q53XZ9
P26440
EC 1.3.8.4
BT007145 AAP35809 Q53XZ9  
AY826821 AAX18641 B1H0U2  
AY826822 AAX18642 B1H0U3  
AY826823 AAX18643 B1H0U4  
DQ892577 ABM83503    
DQ895793 ABM86719    
AK315296 BAG37702 P26440 EC 1.3.8.4
AK122922 BAG53799 B3KVI7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IVD NP_002216 R.norvegicus Ivd 24513   NP_036724 91
M.musculus Ivd 56357 Gene Info NP_062800 91
C.elegans ivd-1 177281   NP_500720 67
D.melanogaster CG6638 38979   NP_648239 66
A.thaliana IVD 823668   NP_190116 65
A.gambiae AgaP_AGAP006780 1270283   XP_308965 64
N.crassa NCU02126 3880448   XP_964284 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)