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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTBS, chitobiase, di-N-acetyl-
Sequence ID:NM_004388
Entrez Gene ID:1486
Ensembl ID:ENSG00000117151

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 85020535 - 85040104

NM_004388 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
5221308501880385020881
213122928502893985029100
229323908502941785029514
239125628503152385031694
256327718503561385035821
277229108503626485036402
291131528503992185040162

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992049Full LengthBC126333chitobiase, di-N-acetyl-
8992051Full LengthBC126335chitobiase, di-N-acetyl-
5200444IncompleteBC065191chitobiase, di-N-acetyl-

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004379  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004388 NP_004379 Q01459 Glyco_hydro_18

Related Sequences

 
mRNAGenPeptSwissProt
M95767 AAA35684 Q01459
BC024007 AAH24007 Q8TC97
BC096752 AAH96752 Q8TC97
BC126333 AAI26334 Q01459
BC126335 AAI26336 Q01459
AK314640 BAG37202 B2RBF5
AK075423 BAG52135 B3KQS3
AK298703 BAG60860 B4DQ98

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTBS NP_004379 M.musculus Ctbs 74245 Gene Info NP_083112 86
R.norvegicus Ctbs 81652   NP_112285 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)