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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TGFB1I1, transforming growth factor beta 1 induced transcript 1
Sequence ID:NM_001042454
NM_001164719
NM_015927
Entrez Gene ID:7041
Ensembl ID:ENSG00000140682

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 31484760 - 31489271

 Exon Info From UCSC:
NM_001042454
NM_001164719
NM_015927

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3030477Full LengthBC001507transforming growth factor beta 1 induced transcript 1
3030477Full LengthBC001830transforming growth factor beta 1 induced transcript 1
4901903Full LengthBC017288transforming growth factor beta 1 induced transcript 1
5535913Full LengthBC032545transforming growth factor beta 1 induced transcript 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057011  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042454 NP_001035919 O43294  
NM_001164719 NP_001158191    
NM_015927 NP_057011   LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF116343 AAD22552 O43294
BC001507 AAH01507 O43294
BC001830 AAH01830 O43294
BC017288 AAH17288 O43294
BC032545 AAH32545 O43294
AB007836 BAA24799 O43294
AK313327 BAG36132 O43294

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TGFB1I1 NP_001035919 R.norvegicus Tgfb1i1 84574   XP_341935 92
M.musculus Tgfb1i1 21804 Gene Info NP_033391 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)