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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNP2, transition protein 2 (during histone to protamine replacement)
Sequence ID:NM_005425
Entrez Gene ID:7142
Ensembl ID:ENSG00000178279

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 11361821 - 11363138

NM_005425 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
41581136171411361868
1595991136271911363159

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40002547Full LengthBC096135transition protein 2 (during histone to protamine replacement)
40002550Full LengthBC096136transition protein 2 (during histone to protamine replacement)
40002553Full LengthBC096137transition protein 2 (during histone to protamine replacement)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005416  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005425 NP_005416 Q05952
Q4VB56
TP2

Related Sequences

 
mRNAGenPeptSwissProt
BC096135 AAH96135 Q05952
Q4VB56
BC096136 AAH96136 Q4VB54
BC096137 AAH96137 Q4VB54
X63758 CAA45290 Q05952
Q4VB56
X63759 CAA45291 Q05952
Q4VB56

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNP2 NP_005416 R.norvegicus Tnp2 24840   NP_058753 51
M.musculus Tnp2 21959 Gene Info NP_038722 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)