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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PTPLAD1, protein tyrosine phosphatase-like A domain containing 1
Sequence ID:NM_016395
Entrez Gene ID:51495
Ensembl ID:ENSG00000074696

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 65822823 - 65869152

 Exon Info From UCSC:
NM_016395

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5491368Full LengthBC058912protein tyrosine phosphatase-like A domain containing 1
5738065Full LengthBC047685protein tyrosine phosphatase-like A domain containing 1
3350634IncompleteBC000194protein tyrosine phosphatase-like A domain containing 1
4498297IncompleteBC019873protein tyrosine phosphatase-like A domain containing 1
4764667IncompleteBC035508protein tyrosine phosphatase-like A domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057479  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016395 NP_057479 Q9P035 EC 4.2.1.134 PTPLA
CS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF161470 AAF29085 Q9P035 EC 4.2.1.134
BC019873 AAH19873 Q9P035 EC 4.2.1.134
BC035508 AAH35508 Q9P035 EC 4.2.1.134
BC047685 AAH47685 Q9P035 EC 4.2.1.134
BC058912 AAH58912 Q9P035 EC 4.2.1.134
AK027421 BAB55101 Q9P035 EC 4.2.1.134
AK074857 BAC11249 Q9P035 EC 4.2.1.134
AK074898 BAC11277 Q9P035 EC 4.2.1.134
AK299234 BAG61266 B4DRF4  
AJ271091 CAB69070 Q9P035 EC 4.2.1.134

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPLAD1 NP_057479 M.musculus Ptplad1 57874 Gene Info NP_067320 91
R.norvegicus RGD1565496 300783   NP_001100301 91
D.melanogaster CG9267 34762   NP_609655 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)