Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HS6ST1, heparan sulfate 6-O-sulfotransferase 1
Sequence ID:NM_004807
RefSeqGene ID:NG_032966
Entrez Gene ID:9394
Ensembl ID:ENSG00000136720

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 129025031 - 129076252

NM_004807 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
163405129023054129026443
34063966129075610129076170

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40005544Full LengthBC096239heparan sulfate 6-O-sulfotransferase 1
40005546Full LengthBC099638heparan sulfate 6-O-sulfotransferase 1
40005547Full LengthBC096240heparan sulfate 6-O-sulfotransferase 1
40005548Full LengthBC099639heparan sulfate 6-O-sulfotransferase 1
3355592IncompleteBC001196heparan sulfate 6-O-sulfotransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004807 NP_004798 O60243 HS6ST

Related Sequences

 
mRNAGenPeptSwissProt
BC001196 AAH01196 O60243
BC096239 AAH96239 O60243
BC096240 AAH96240 O60243
BC099638 AAH99638 O60243
BC099639 AAH99639 O60243
AB006179 BAA25760 O60243

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HS6ST1 NP_004798 M.musculus Hs6st1 50785 Gene Info NP_056633 97
R.norvegicus Hs6st1 316325   NP_001101680 97
D.melanogaster Hs6st 42380   NP_524409 56
A.gambiae AgaP_AGAP001444 1281734   XP_321686 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)