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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFTPB, surfactant protein B
Sequence ID:NM_000542
NM_198843
RefSeqGene ID:NG_016967
Entrez Gene ID:6439
Ensembl ID:ENSG00000168878

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
SURFACTANT METABOLISM DYSFUNCTION, PULMONARY, 1CSF2RB
SFTPC

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p12-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 85885196 - 85888635

 Exon Info From UCSC:
NM_000542
NM_198843

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5179408Full LengthBC032785surfactant protein B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_942140  NP_000533  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000542 NP_000533 P07988 SapA
SapB_2
SapB_1
NM_198843 NP_942140 P07988 SapA
SapB_2
SapB_1

Related Sequences

 
mRNAGenPeptSwissProt
M19097 AAA36628 P07988
J02761 AAA60212 P07988
M16764 AAA88099 P07988
BC032785 AAH32785 P07988
DQ317589 ABC59511 A0SEC1
HQ447860 ADQ32344  
AK314947 BAG37452 B2RC55
AK303817 BAG64767 B4E1F5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFTPB NP_000533 M.musculus Sftpb 20388 Gene Info NP_680088 73
R.norvegicus Sftpb 192155   NP_620197 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)