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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLEC11A, C-type lectin domain family 11, member A
Sequence ID:NM_002975
Entrez Gene ID:6320
Ensembl ID:ENSG00000105472

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 51226782 - 51228724

NM_002975 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13255122660451226928
3265125122716151227347
5137045122766651227857
70514055122827851228978

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3830506Full LengthBC005810C-type lectin domain family 11, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002966  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002975 NP_002966 Q9Y240 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF020044 AAC39569 Q9Y240
BC005810 AAH05810 Q9Y240
BT019673 AAV38479 Q5U0B9
AY870345 AAX62798 A0AUH1
HQ448166 ADQ32647  
D86586 BAA21499  
AB009244 BAA32404 Q9Y240
AK314141 BAG36831 Q9Y240

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLEC11A NP_002966 M.musculus Clec11a 20256 Gene Info NP_033157 85
R.norvegicus Clec11a 29313   NP_001012477 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)