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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCAT2, branched chain amino-acid transaminase 2, mitochondrial
Sequence ID:NM_001164773
NM_001190
NR_028450
NR_028451
RefSeqGene ID:NG_013003
Entrez Gene ID:587
Ensembl ID:ENSG00000105552

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 49298320 - 49314269

 Exon Info From UCSC:
NM_001164773
NM_001190

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3537603Full LengthBC001900branched chain aminotransferase 2, mitochondrial
3615774IncompleteBC004243branched chain aminotransferase 2, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001181  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001164773 NP_001158245      
NM_001190 NP_001181 O15382 EC 2.6.1.42 Aminotran_4

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U62739 AAB53087 O15382 EC 2.6.1.42
U68418 AAB67672 O15382 EC 2.6.1.42
BC001900 AAH01900 O15382 EC 2.6.1.42
BC004243 AAH04243 O15382 EC 2.6.1.42
AF268047 AAK38368 O15382 EC 2.6.1.42
AF268048 AAK38369 O15382 EC 2.6.1.42
DQ892350 ABM83276    
DQ895554 ABM86480    
AK223522 BAD97242 Q53EW7  
AK314548 BAG37134 O15382 EC 2.6.1.42
AK093627 BAG52745 B3KSI3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCAT2 NP_001181 M.musculus Bcat2 12036 Gene Info NP_033867 84
R.norvegicus Bcat2 64203   NP_071795 81
C.elegans bcat-1 181423   NP_510144 50
S.pombe eca39 2540831   NP_595180 47
S.cerevisiae BAT1 856615   NP_012078 46
N.crassa NCU04754 3876434   XP_960287 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)