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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC46A2, Solute carrier family 46, member 2
Sequence ID:NM_033051
Entrez Gene ID:57864
Ensembl ID:ENSG00000119457

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 115641495 - 115653193

NM_033051 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18916115641200115642098
9171073115648739115648895
10741157115649609115649692
11582518115651832115653192

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5213610Full LengthBC048285solute carrier family 46, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149040  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033051 NP_149040 Q9BY10 MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
BC048285 AAH48285 Q9BY10
AF242557 AAK28343 Q9BY10
HQ448607 ADQ33085  
AK055571 BAB70960 Q9BY10
AK314414 BAG37035 Q9BY10

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC46A2 NP_149040 M.musculus Slc46a2 30936 Gene Info NP_066395 78
R.norvegicus Slc46a2 298034   NP_001100122 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)