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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSPH, phosphoserine phosphatase
Sequence ID:NM_004577
RefSeqGene ID:NG_011473
Entrez Gene ID:5723
Ensembl ID:ENSG00000146733

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PHOSPHOSERINE PHOSPHATASE DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 56079243 - 56088924

NM_004577 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
278435607874556079561
8449925608271556082863
99311385608492656085071
113912735608729256087426
127414325608876556088923
143315585609962156099746
155917045610165356101798
170521425611883056119267

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3850060Full LengthBC063614phosphoserine phosphatase
4819216IncompleteBC052958phosphoserine phosphatase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004568  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004577 NP_004568 P78330 EC 3.1.3.3 Hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC063614 AAH63614 P78330 EC 3.1.3.3
HQ448105 ADQ32586    
AK223508 BAD97228 Q53EY1  
AK315235 BAG37662 P78330 EC 3.1.3.3
BX537439 CAD97681 P78330 EC 3.1.3.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSPH NP_004568 R.norvegicus Psph 304429   NP_001009679 95
M.musculus Psph 100678 Gene Info NP_598661 94
C.elegans Y62E10A.13 178304   NP_502581 53
D.melanogaster aay 39085   NP_524001 51
A.gambiae AgaP_AGAP012247 1280442   XP_320295 50
A.thaliana PSP 838445   NP_973858 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)