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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATXN7L3, ataxin 7-like 3
Sequence ID:NM_001098833
NM_020218
Entrez Gene ID:56970
Ensembl ID:ENSG00000087152

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 42269964 - 42274385

 Exon Info From UCSC:
NM_001098833
NM_020218

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322647Full LengthBC113595ataxin 7-like 3
8991829Full LengthBC126113ataxin 7-like 3
4478232IncompleteBC024695ataxin 7-like 3
5499446IncompleteBC037418ataxin 7-like 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098833 NP_001092303 Q14CW9  
NM_020218 NP_064603    

Related Sequences

 
mRNAGenPeptSwissProt
BC037418 AAH37418 Q14CW9
BC113595 AAI13596 Q14CW9
BC126113 AAI26114 Q14CW9
HQ258188 ADR82942  
AK056002 BAB71070 Q14CW9
AK296689 BAG59283 B4DKS1
AL390158 CAB99093 Q14CW9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATXN7L3 NP_001092303 M.musculus Atxn7l3 217218 Gene Info NP_001092307 99
R.norvegicus Atxn7l3 287734   XP_002727866 99
A.gambiae SGF11_ANOGA 1281785   XP_321744 46
D.melanogaster Sgf11 40035   NP_001097638 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)