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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PRG2, proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)
Sequence ID:NM_001243245
NM_002728
Entrez Gene ID:5553
Ensembl ID:ENSG00000186652

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 57154947 - 57158119

Transcript StartTranscript EndChromosomal Start Chromosomal End
191905715483457155005
1913025715522657155337
3034345715604957156180
4357425715648257156789
7438125715735957157428
8138745715806857158129

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4043815Full LengthBC005929proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002719  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243245 NP_001230174    
NM_002728 NP_002719 P13727 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
M35670 AAA35965 P13727
M36805 AAA36203 P13727
BC005929 AAH05929 P13727
DQ846874 ABI63361 A6XMW0
DQ893180 ABM84106  
DQ896482 ABM87481  
AK312195 BAG35128 B2R5I1
X14088 CAA32250 P13727
X65787 CAA46670 P13727
Y00809 CAA68751 P13727
Z26248 CAA81207 P13727
CR450311 CAG29307 P13727

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRG2 NP_002719 M.musculus Prg2 19074 Gene Info NP_032946 61
R.norvegicus Prg2 58826   NP_113807 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)