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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT33A, keratin 33A
Sequence ID:NM_004138
RefSeqGene ID:NG_012289
Entrez Gene ID:3883
Ensembl ID:ENSG00000006059

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12-q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39502344 - 39507064

NM_004138 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11183950237039502487
1193393950269939502919
3404653950309539503220
4666273950331239503473
6287843950473439504890
7858673950559739505679
86812523950667139507055

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7216991Full LengthBC069135keratin 33A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004129  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004138 NP_004129 O76009 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC069135 AAH69135 O76009
AK314088 BAG36784 O76009
AJ633621 CAG17613 O76009

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT33A NP_004129 R.norvegicus Krt33a 303527   NP_001008757 91
M.musculus Krt33a 71888 Gene Info NP_082259 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)