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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SURF1, surfeit 1
Sequence ID:NM_003172
RefSeqGene ID:NG_008477
Entrez Gene ID:6834
Ensembl ID:ENSG00000148290

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LEIGH SYNDROMEBCS1L
COX15
DLD
FOXRED1
NDUFA10
NDUFA12
NDUFA2
NDUFA9
NDUFAF2
NDUFAF6
NDUFS3
NDUFS4
NDUFS7
NDUFS8
NDUFV1
SDHA

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 136218691 - 136223344

NM_003172 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1172136218665136218836
173254136218915136218996
255417136219300136219462
418490136219548136219620
491682136220603136220794
683765136221513136221595
766899136221678136221811
900951136223123136223174
9521037136223275136223360

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5190921Full LengthBC028314surfeit 1
5539506Full LengthBC071658surfeit 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003163  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003172 NP_003163 Q15526 SURF1

Related Sequences

 
mRNAGenPeptSwissProt
BC028314 AAH28314 Q15526
BC071658 AAH71658 Q15526
DQ890823 ABM81749  
DQ893977 ABM84903  
AK291122 BAF83811 Q15526
Z35093 CAA84476 Q15526

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SURF1 NP_003163 M.musculus Surf1 20930 Gene Info NP_038705 80
R.norvegicus Surf1 64463   NP_742065 79
A.gambiae AgaP_AGAP006533 1277131   XP_316569 48
D.melanogaster Surf1 44498   NP_524758 48
C.elegans sft-1 175415   NP_497657 46
A.thaliana SURF1 821310   NP_566592 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)