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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITPR2, Inositol 1,4,5-trisphosphate receptor, type 2
Sequence ID:NM_002223
Entrez Gene ID:3709
Ensembl ID:ENSG00000123104

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 26874219 - 26985714

 Exon Info From UCSC:
NM_002223

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069077Full LengthBC172383inositol 1,4,5-triphosphate receptor, type 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002214  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002223 NP_002214 Q14571 Ion_trans
RYDR_ITPR
MIR
RIH_assoc

Related Sequences

 
mRNAGenPeptSwissProt
BC172383 AAI72383  
D26350 BAA05384 Q14571
AB012610 BAA33961 Q14571

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITPR2 NP_002214 M.musculus Itpr2 16439 Gene Info NP_064307 96
R.norvegicus Itpr2 81678   NP_112308 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)