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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHIP, pleckstrin homology domain interacting protein
Sequence ID:NM_017934
Entrez Gene ID:55023
Ensembl ID:ENSG00000146247

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 79650281 - 79688429

 Exon Info From UCSC:
NM_017934

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021488Full LengthBC137488pleckstrin homology domain interacting protein
3830844IncompleteBC008909pleckstrin homology domain interacting protein
4341693IncompleteBC021905pleckstrin homology domain interacting protein
5260603IncompleteBC036479pleckstrin homology domain interacting protein
5581575IncompleteBC064611pleckstrin homology domain interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060404  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017934 NP_060404 Q8WWQ0 WD40
Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
AF310250 AAG45145 Q8WWQ0
BC008909 AAH08909 Q8WWQ0
BC021905 AAH21905 Q8WWQ0
BC081569 AAH81569 Q8WWQ0
BC137488 AAI37489 Q8WWQ0
DQ924532 ABK76299 A7J992
AK000712 BAA91336 Q9NWP3
AK057039 BAB71353 Q8WWQ0
AK075124 BAC11417 Q8WWQ0
AJ303102 CAC83118 Q8WWQ0
AL161957 CAH10776 Q8WWQ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHIP NP_060404 M.musculus Phip 83946 Gene Info NP_001074685 95
R.norvegicus RGD1564964 315843   NP_001128036 93
A.thaliana AT5G49430 835003   NP_199754 35
A.thaliana AT2G47410 819354   NP_850474 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)