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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GJB6, gap junction protein, beta 6, 30kDa
Sequence ID:NM_001110219
NM_001110220
NM_001110221
NM_006783
RefSeqGene ID:NG_008323
Entrez Gene ID:10804
Ensembl ID:ENSG00000121742

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DEAFNESS, AUTOSOMAL DOMINANT 3B 
DEAFNESS, AUTOSOMAL RECESSIVE 1AGJB2
GJB2
GJB3
DEAFNESS, AUTOSOMAL RECESSIVE 1B 
DEAFNESS, AUTOSOMALDOMINANT 3AGJB2
GJB2
ECTODERMAL DYSPLASIA,HIDROTIC 

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 20796102 - 20806366

 Exon Info From UCSC:
NM_001110219
NM_001110220
NM_001110221
NM_006783

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5196769Full LengthBC038934gap junction protein, beta 6, 30kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006774  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110219 NP_001103689    
NM_001110220 NP_001103690    
NM_001110221 NP_001103691    
NM_006783 NP_006774 O95452 Connexin

Related Sequences

 
mRNAGenPeptSwissProt
BC038934 AAH38934 O95452
AY297110 AAP51162 O95452
AY789474 AAV67951 O95452
AY789475 AAV67952 O95452
AY789476 AAV67953 O95452
AK289592 BAF82281 O95452
AK075247 BAG52094 O95452

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GJB6 NP_001103689 M.musculus Gjb6 14623 Gene Info NP_001010937 95
R.norvegicus Gjb6 84403   NP_445840 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)