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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. APH1B, anterior pharynx defective 1 homolog B (C. elegans)
Sequence ID:NM_001145646
NM_031301
Entrez Gene ID:83464
Ensembl ID:ENSG00000138613

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 63569808 - 63598000

 Exon Info From UCSC:
NM_001145646
NM_031301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4720647Full LengthBC020905anterior pharynx defective 1 homolog B (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112591  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145646 NP_001139118    
NM_031301 NP_112591 Q8WW43 Aph-1

Related Sequences

 
mRNAGenPeptSwissProt
BC020905 AAH20905 Q8WW43
AF508794 AAN63817 Q8WW43
AY358698 AAQ89061 Q8WW43
DQ891401 ABM82327  
AB189172 BAD95573 Q8WW43
AB197122 BAE02660 Q4R1J8
AK291204 BAF83893 Q8WW43
AL136671 CAB66606 Q8WW43
AM392724 CAL37602  
AM392878 CAL37756  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APH1B NP_112591 M.musculus Aph1b 208117 Gene Info NP_808251 84
R.norvegicus Aph1b 300802   NP_001040555 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)