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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TJP1, tight junction protein 1
Sequence ID:NM_003257
NM_175610
Entrez Gene ID:7082
Ensembl ID:ENSG00000104067

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 29992358 - 30092905

 Exon Info From UCSC:
NM_003257
NM_175610

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40037646Full LengthBC111712tight junction protein 1 (zona occludens 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_783297  NP_003248  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003257 NP_003248 Q07157 PDZ
Guanylate_kin
ZU5
SH3_2
NM_175610 NP_783297   PDZ
Guanylate_kin
ZU5
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
BC111712 AAI11713 Q07157
EU832042 ACE86704  
EU831947 ACE87388  
AB370197 BAF95000 A9CQZ8
AK302971 BAG64116 B4DZK4
AK304758 BAG65513 Q07157
BX640879 CAE45936 Q6MZU1
CR749235 CAH18091 Q68DX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TJP1 NP_003248 M.musculus Tjp1 21872 Gene Info NP_033412 91
R.norvegicus Tjp1 292994   NP_001099736 91
C.elegans zoo-1 173316   NP_001021685 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)