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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BATF, basic leucine zipper transcription factor, ATF-like
Sequence ID:NM_006399
Entrez Gene ID:10538
Ensembl ID:ENSG00000156127

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 75988786 - 76013334

NM_006399 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13057598878375989087
3064107599142675991530
4119337601280476013326

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3916360Full LengthBC032294basic leucine zipper transcription factor, ATF-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006390  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006399 NP_006390 Q16520 bZIP_1

Related Sequences

 
mRNAGenPeptSwissProt
U15460 AAC50314 Q16520
BC032294 AAH32294 Q16520
D42106 BAA07686 Q16520

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BATF NP_006390 M.musculus Batf 53314 Gene Info NP_058047 96
R.norvegicus Batf 299206   NP_001100218 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)