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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSP90AB1, heat shock protein 90kDa alpha (cytosolic), class B member 1
Sequence ID:NM_007355
Entrez Gene ID:3326
Ensembl ID:ENSG00000096384

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 44217242 - 44221453

 Exon Info From UCSC:
NM_007355

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2987963Full LengthBC016753heat shock protein 90kDa alpha (cytosolic), class B member 1
3530042Full LengthBC012807heat shock protein 90kDa alpha (cytosolic), class B member 1
3621040Full LengthBC004928heat shock protein 90kDa alpha (cytosolic), class B member 1
4824686Full LengthBC068474heat shock protein 90kDa alpha (cytosolic), class B member 1
4870198Full LengthBC014485heat shock protein 90kDa alpha (cytosolic), class B member 1
3615632IncompleteBC009206heat shock protein 90kDa alpha (cytosolic), class B member 1
3641489IncompleteBC007327heat shock protein 90kDa alpha (cytosolic), class B member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031381  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007355 NP_031381 P08238 HSP90
HATPase_c

Related Sequences

 
mRNAGenPeptSwissProt
M16660 AAA36025 P08238
AF275719 AAF82792 P08238
BC004928 AAH04928 P08238
BC007327 AAH07327 Q6PK50
BC009206 AAH09206 P08238
BC012807 AAH12807 P08238
BC014485 AAH14485 P08238
BC016753 AAH16753 P08238
BC068474 AAH68474 P08238
AY359878 AAQ63401 P08238
DQ893024 ABM83950  
DQ896268 ABM87267  
AK025370 BAB15121 Q9H6X9
AK290734 BAF83423 A8K3W9
AK312255 BAG35187 P08238
AK294643 BAG57821 B4DGL0
AK297367 BAG59814 B4DMA2
AL136543 CAB66478 P08238

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSP90AB1 NP_031381 M.musculus Hsp90ab1 15516 Gene Info NP_032328 100
R.norvegicus Hsp90ab1 301252   NP_001004082 100
A.gambiae HSP83_ANOGA 1270128   XP_308800 81
D.melanogaster Hsp83 38389   NP_523899 78
C.elegans daf-21 179971   NP_506626 77
A.thaliana HSP81-2 835701   NP_001190553 71
A.thaliana HSP81-3 835699   NP_200412 71
A.thaliana Hsp81.4 835698   NP_200411 71
P.falciparum PF07_0029 2655065   XP_001348998 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)