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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACTR10, actin-related protein 10 homolog (S. cerevisiae)
Sequence ID:NM_018477
Entrez Gene ID:55860
Ensembl ID:ENSG00000131966

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 58666855 - 58701522

 Exon Info From UCSC:
NM_018477

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3862712Full LengthBC011997actin-related protein 10 homolog (S. cerevisiae)
3950510IncompleteBC005208actin-related protein 10 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060947  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018477 NP_060947 Q9NZ32 Actin

Related Sequences

 
mRNAGenPeptSwissProt
AF220190 AAF67655 Q9NZ32
BC005208 AAH05208 Q05DQ7
BC011997 AAH11997 Q9NZ32
DQ891294 ABM82220  
DQ894478 ABM85404  
AK000544 BAA91243 Q9NZ32
AK022534 BAB14083 Q9NZ32
AK222624 BAD96344 Q53HF6
AK222702 BAD96422 Q53H79
AK315537 BAG37916 B2RDG9
BX161491 CAD61940 Q86SY7
BX248282 CAD62610 Q86TY2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACTR10 NP_060947 M.musculus Actr10 56444 Gene Info NP_062759 95
R.norvegicus Actr10 299121   NP_001009602 95
D.melanogaster Arp11 32969   NP_608338 44
A.gambiae AgaP_AGAP012077 1280597   XP_320451 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)