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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDGFRB, platelet-derived growth factor receptor, beta polypeptide
Sequence ID:NM_002609
RefSeqGene ID:NG_023367
Entrez Gene ID:5159
Ensembl ID:ENSG00000113721

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MYELOPROLIFERATIVE DISORDER WITH EOSINOPHILIAETV6

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149495289 - 149535422

 Exon Info From UCSC:
NM_002609

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5309813Full LengthBC032224platelet-derived growth factor receptor, beta polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002600  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002609 NP_002600 P09619 EC 2.7.10.1 ig
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M21616 AAA36427 P09619 EC 2.7.10.1
J03278 AAA60049 P09619 EC 2.7.10.1
BC032224 AAH32224 P09619 EC 2.7.10.1
DQ892124 ABM83050    
EU176549 ABW03350    
EU826595 ACF47631 B5A957  
AB209657 BAD92894 Q59F04  
AK293093 BAF85782 A8KAM8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDGFRB NP_002600 R.norvegicus Pdgfrb 24629   NP_113713 87
M.musculus Pdgfrb 18596 Gene Info NP_001139740 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)