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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDC42SE2, CDC42 small effector 2
Sequence ID:NM_001038702
NM_020240
Entrez Gene ID:56990
Ensembl ID:ENSG00000158985

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 130728310 - 130730360

 Exon Info From UCSC:
NM_001038702
NM_020240

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40021506Full LengthBC096703CDC42 small effector 2
40021509Full LengthBC096738CDC42 small effector 2
6046666IncompleteBC050430CDC42 small effector 2
6528127IncompleteBC058909CDC42 small effector 2
40021504IncompleteBC098349CDC42 small effector 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064625  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001038702 NP_001033791    
NM_020240 NP_064625 Q9NRR3 PBD

Related Sequences

 
mRNAGenPeptSwissProt
AF189692 AAF87598 Q9NRR3
BC096703 AAH96703 Q9NRR3
BC096738 AAH96738 Q9NRR3
BC098349 AAH98349 Q9NRR3
AK312406 BAG35319 Q9NRR3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDC42SE2 NP_001033791 M.musculus Cdc42se2 72729 Gene Info NP_848741 100
R.norvegicus LOC100362023 100362023   XP_002728806 100
R.norvegicus Cdc42se2 691031   NP_001119561 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)