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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGEF7, Rho guanine nucleotide exchange factor (GEF) 7
Sequence ID:NM_001113511
NM_001113512
NM_001113513
NM_003899
NM_145735
Entrez Gene ID:8874
Ensembl ID:ENSG00000102606

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 111927098 - 111945785

 Exon Info From UCSC:
NM_001113511
NM_001113512
NM_001113513
NM_003899
NM_145735

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5262912Full LengthBC033905Rho guanine nucleotide exchange factor (GEF) 7
5271977Full LengthBC060776Rho guanine nucleotide exchange factor (GEF) 7
4508752IncompleteBC050521Rho guanine nucleotide exchange factor (GEF) 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663788  NP_003890  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113511 NP_001106983 Q14155  
NM_001113512 NP_001106984    
NM_001113513 NP_001106985    
NM_003899 NP_003890   SH3_1
PH
RhoGEF
SH3_2
NM_145735 NP_663788   SH3_1
PH
CH
RhoGEF
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
BC033905 AAH33905 Q14155
BC050521 AAH50521 Q14155
BC060776 AAH60776 Q14155
EU832554 ACE86956  
EU832475 ACE87647  
EU832819 ACE87830  
GQ129214 ACT64348  
D63476 BAA09763 Q14155
AB177848 BAD66826 Q5W9H1
AB177849 BAD66827 Q14155
AB075521 BAE45764 Q14155
AK295472 BAH12080 B7Z344
AK300157 BAH13225 B7Z6D9
AK300272 BAH13248 B7Z6G2
AL834228 CAD38906 Q14155
AJ844629 CAH59748 Q5ZEZ3
AJ844631 CAH59949 Q5ZEZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGEF7 NP_663788 M.musculus Arhgef7 54126 Gene Info NP_001106989 95
C.elegans pix-1 181490   NP_510297 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)