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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CARS2, cysteinyl-tRNA synthetase 2, mitochondrial (putative)
Sequence ID:NM_024537
Entrez Gene ID:79587
Ensembl ID:ENSG00000134905

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 111293763 - 111358438

 Exon Info From UCSC:
NM_024537

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822557Full LengthBC007220cysteinyl-tRNA synthetase 2, mitochondrial (putative)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078813  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001267728 NP_001254657      
NM_005537 NP_005528 Q9UK53   PHD
NM_024537 NP_078813 Q9HA77 EC 6.1.1.16 tRNA-synt_1e
NM_198217 NP_937860     PHD
NM_198218 NP_937861     PHD
NM_198219 NP_937862     PHD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF001954 AAB60879 Q9UK53  
AF044076 AAC00501 Q9UK53  
AF181849 AAF07920 Q9UK53  
AF181850 AAF07921 Q9UK53  
AF149721 AAF37421 Q9UK53  
AF149722 AAF37422 Q9UK53  
AF149723 AAF37423 Q9UK53  
AF078835 AAG12174 Q9UK53  
BC007220 AAH07220 Q9HA77 EC 6.1.1.16
BC093942 AAH93942 Q9UK53  
BC093944 AAH93944 Q9UK53  
AB024401 BAA82886 Q9UK53  
AB024402 BAA82887 Q9UK53  
AB031269 BAA83496 Q9UK53  
AK022180 BAB13978 Q9HA77 EC 6.1.1.16
AB037594 BAB20992 Q9UK53  
AB062436 BAB93499 Q9HA77 EC 6.1.1.16
AK302353 BAG63679 Q9UK53  
AK301907 BAH13582 B7Z7E6  
AJ310392 CAC38067 Q9UK53  
BX649191 CAE46210 Q6MZE5  
BX648882 CAH10378 Q6AW83  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CARS2 NP_078813 M.musculus Cars2 71941 Gene Info NP_077210 80
R.norvegicus RGD1311612 361184   XP_002728484 78
A.gambiae AgaP_AGAP011821 4577535   XP_001238361 44
D.melanogaster CG8257 36563   NP_610930 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)