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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZIC5, Zic family member 5
Sequence ID:NM_033132
Entrez Gene ID:85416
Ensembl ID:ENSG00000139800

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 100617450 - 100624163

NM_033132 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112809100615274100618072
28104607100622380100624177

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149123  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033132 NP_149123 Q96T25 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF378304 AAK55418 Q96T25

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZIC5 NP_149123 R.norvegicus Zic5 361095   NP_001101861 94
M.musculus Zic5 65100 Gene Info NP_075363 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)