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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AMACR, alpha-methylacyl-CoA racemase
Sequence ID:NM_001167595
NM_014324
NM_203382
NM_001167596
NM_001167597
NM_001167598
RefSeqGene ID:NG_016211
Entrez Gene ID:23600
Ensembl ID:ENSG00000242110

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 33988394 - 34008213

 Exon Info From UCSC:
NM_001167595
NM_014324
NM_203382
NM_001167596
NM_001167597
NM_001167598

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2958112Full LengthBC009471alpha-methylacyl-CoA racemase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055139  NP_976316  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001167595 NP_001161067      
NM_014324 NP_055139 Q9UHK6 EC 5.1.99.4 CoA_transf_3
NM_203382 NP_976316     CoA_transf_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF047020 AAD10205 Q9UHK6 EC 5.1.99.4
AF158378 AAF22610 Q9UHK6 EC 5.1.99.4
BC009471 AAH09471 Q9UHK6 EC 5.1.99.4
BT007193 AAP35857 Q9UHK6 EC 5.1.99.4
AY330488 AAQ67234 Q6VRU4  
AY330489 AAQ94259 Q6VRU3  
AY935981 AAY16192 Q3KT79  
EF560721 ABQ59031 Q9UHK6 EC 5.1.99.4
FJ498906 ACL67853 Q9UHK6 EC 5.1.99.4
FJ498907 ACL67854 Q9UHK6 EC 5.1.99.4
FJ498908 ACL67855 Q9UHK6 EC 5.1.99.4
AK222831 BAD96551 Q53GV0  
AK292988 BAF85677 A8KAC3  
AK000912 BAG50838 B3KM26  
AK022765 BAG51110 B3KMU8  
AJ130733 CAB44062 Q9UHK6 EC 5.1.99.4
AM392625 CAL37503    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AMACR NP_055139 R.norvegicus Amacr 25284   NP_036948 78
M.musculus Amacr 17117 Gene Info NP_032563 77
A.gambiae AgaP_AGAP008414 1277563   XP_317033 56
D.melanogaster CG9319 35337   NP_610054 56
N.crassa NCU04099 3877008   XP_960861 52
C.elegans ZK892.4 174559   NP_496163 47
C.elegans C24A3.4 181140   NP_509517 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)